Statistics and Breed-wide Allele Frequency - Swedish Vallhund

Updated Feb 25, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Swedish Vallhund (n=624)
1006	387 375 293 180	0.2284
1009	382 377 277 184	0.0521
1068	380 373 287 181	0.3646
1177	395 373 277 181	0.1731
1178	386 365 277 186	0.1667
1179	395 375 293 180	0.0024
1259	387 373 287 181	0.0128

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Swedish Vallhund (n=624)
2007	351 327 280	0.2308
2022	339 327 282	0.0521
2053	343 324 280	0.5441
2066	339 324 280	0.0008
2084	339 323 268	0.1723

Allele Frequencies

#	Locus Name	Allele	Swedish Vallhund (n=625)
1	AHT121	94	0.1184
		96	0.3024
		98	0.0800
		100	0.4304
		102	0.0632
		106	0.0056
2	AHT137	131	0.3272
		133	0.0208
		135	0.1184
		137	0.5296
		139	0.0016
		147	0.0024
3	AHTH130	119	0.1240
		121	0.0880
		127	0.0656
		129	0.0128
		131	0.0008
		133	0.0016
		135	0.7072
4	AHTh171-A	221	0.6520
		225	0.1544
		227	0.0352
		229	0.0568
		233	0.1016
5	AHTh260	246	0.5376
		248	0.3000
		250	0.0032
		254	0.1592
6	AHTk211	87	0.4144
		89	0.1312
		91	0.4544
7	AHTk253	282	0.1952
		286	0.0656
		288	0.3648
		290	0.0960
		292	0.1896
		294	0.0888
8	C22.279	116	0.3088
		118	0.0016
		124	0.6336
		130	0.0560
9	FH2001	132	0.2400
		140	0.0064
		144	0.6224
		148	0.0688
		152	0.0624
10	FH2054	148	0.1304
		152	0.1264
		156	0.6400
		160	0.0448
		164	0.0032
		172	0.0544
		176	0.0008
11	FH2848	232	0.1688
		236	0.0320
		238	0.1112
		240	0.6656
		244	0.0224
12	INRA21	95	0.0360
		97	0.2328
		99	0.0512
		101	0.6800
13	INU005	122	0.0464
		124	0.9048
		126	0.0488
14	INU030	144	0.2072
		148	0.0448
		150	0.6976
		152	0.0504
15	INU055	210	0.2648
		212	0.0944
		214	0.3568
		216	0.2840
16	LEI004	85	0.1344
		95	0.5304
		97	0.0528
		105	0.1512
		107	0.1312
17	REN105L03	231	0.1176
		233	0.2024
		235	0.1672
		239	0.0904
		241	0.4224
18	REN162C04	200	0.2448
		202	0.2904
		204	0.2040
		206	0.2576
		210	0.0032
19	REN169D01	202	0.2616
		210	0.1016
		216	0.1504
		218	0.4864
20	REN169O18	162	0.6464
		170	0.3496
		174	0.0040
21	REN247M23	268	0.8736
21	REN247M23	272	0.1264
22	REN54P11	226	0.8968
		234	0.0872
		244	0.0160
23	REN64E19	145	0.0752
		147	0.4592
		149	0.4640
		153	0.0016
24	VGL0760	12	0.0664
		14	0.1096
		15	0.0032
		20.2	0.3000
		21.2	0.2896
		22.2	0.0088
		23.2	0.0512
		24.2	0.1712
25	VGL0910	18.1	0.0016
		19.1	0.1424
		20.1	0.4632
		21.1	0.3400
		22.1	0.0512
		23.1	0.0016
26	VGL1063	8	0.0192
		12	0.1312
		13	0.1672
		14	0.0912
		15	0.4472
		16	0.0088
		19	0.0296
		20	0.0744
		21	0.0312
27	VGL1165	18	0.0144
		20	0.4600
		22	0.0008
		23	0.2616
		24	0.0256
		25	0.1456
		26	0.0920
28	VGL1828	15	0.0016
		16	0.0456
		17	0.2312
		18	0.0008
		19	0.6216
		20	0.0992
29	VGL2009	13	0.1248
		14	0.0192
		15	0.6608
		16	0.1896
		17	0.0056
30	VGL2409	14	0.2584
		15	0.0016
		16	0.4464
		17	0.2912
		18	0.0016
		19	0.0008
31	VGL2918	13	0.2024
		14	0.6784
		15	0.0360
		17.3	0.0008
		18.3	0.0424
		19.3	0.0376
		20.3	0.0024
32	VGL3008	16	0.2448
		17	0.4968
		18	0.1848
		19	0.0136
		20	0.0600
33	VGL3235	14	0.5856
		15	0.0824
		16	0.0072
		17	0.0152
		18	0.3096

Standard genetic assessment based on 33 autosomal STR loci

Swedish Vallhund

		N	Na	Ne	Ho	He	F
	Mean	625	5.091	2.578	0.563	0.567	0.010
	SE		0.269	0.146	0.026	0.026	0.007

Standard genetic assessment based on 7 STRs in the DLA region

Swedish Vallhund

		N	Na	Ne	Ho	He	F
	Mean	625	3.571	2.647	0.616	0.598	-0.031
	SE		0.275	0.247	0.042	0.040	0.006

Standard genetic assessment for individual STR loci

Swedish Vallhund

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	625	6	3.321	0.664	0.699	0.050
2	AHT137	625	6	2.488	0.571	0.598	0.045
3	AHTH130	625	7	1.895	0.499	0.472	-0.057
4	AHTh171-A	625	5	2.156	0.547	0.536	-0.020
5	AHTh260	625	4	2.473	0.603	0.596	-0.013
6	AHTk211	625	3	2.529	0.618	0.605	-0.022
7	AHTk253	625	6	4.376	0.790	0.771	-0.025
8	C22.279	625	4	2.000	0.482	0.500	0.037
9	FH2001	625	5	2.204	0.539	0.546	0.013
10	FH2054	625	7	2.234	0.590	0.552	-0.069
11	FH2848	625	5	2.060	0.512	0.515	0.005
12	INRA21	625	4	1.921	0.477	0.479	0.006
13	INU005	625	3	1.215	0.162	0.177	0.086
14	INU030	625	4	1.872	0.475	0.466	-0.020
15	INU055	625	4	3.484	0.688	0.713	0.035
16	LEI004	625	5	2.922	0.619	0.658	0.059
17	REN105L03	625	5	3.713	0.760	0.731	-0.040
18	REN162C04	625	5	3.964	0.714	0.748	0.046
19	REN169D01	625	4	2.959	0.645	0.662	0.026
20	REN169O18	625	3	1.852	0.446	0.460	0.029
21	REN247M23	625	2	1.283	0.221	0.221	0.000
22	REN54P11	625	3	1.231	0.182	0.188	0.029
23	REN64E19	625	4	2.316	0.578	0.568	-0.017
24	VGL0760	625	8	4.498	0.781	0.778	-0.004
25	VGL0910	625	6	2.832	0.621	0.647	0.040
26	VGL1063	625	9	3.827	0.744	0.739	-0.007
27	VGL1165	625	7	3.220	0.702	0.689	-0.019
28	VGL1828	625	6	2.214	0.542	0.548	0.011
29	VGL2009	625	5	2.047	0.517	0.511	-0.011
30	VGL2409	625	6	2.850	0.651	0.649	-0.003
31	VGL2918	625	7	1.977	0.490	0.494	0.009
32	VGL3008	625	5	2.901	0.658	0.655	-0.003
33	VGL3235	625	5	2.243	0.488	0.554	0.119

Standard genetic assessment for 7 STRs in the DLA region

Swedish Vallhund

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	625	5	3.961	0.781	0.748	-0.044
2	DLA I-4ACA	625	4	2.582	0.619	0.613	-0.011
3	DLA I-4BCT	625	3	2.863	0.688	0.651	-0.057
4	DLA1131	625	4	2.582	0.619	0.613	-0.011
5	5ACA	625	3	2.501	0.616	0.600	-0.027
6	5ACT	625	3	2.461	0.608	0.594	-0.024
7	5BCA	625	3	1.579	0.382	0.367	-0.043

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Swedish Vallhund

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Swedish Vallhund

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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