Updated Jan 8, 2025
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Poodle (n=5637) |
---|---|---|
1001 | 380 373 281 182 | 0.26610 |
1002 | 380 365 281 181 | 0.16064 |
1003 | 387 375 277 186 | 0.17447 |
1004 | 393 379 277 183 | 0.08364 |
1005 | 389 371 277 181 | 0.06927 |
1006 | 387 375 293 180 | 0.04949 |
1007 | 380 372 281 182 | 0.03335 |
1008 | 386 373 289 182 | 0.01233 |
1009 | 382 377 277 184 | 0.01490 |
1010 | 384 371 277 186 | 0.01126 |
1011 | 376 365 281 180 | 0.01934 |
1012 | 388 369 289 188 | 0.01464 |
1013 | 392 373 289 186 | 0.00852 |
1014 | 375 373 287 178 | 0.01082 |
1015 | 380 373 291 186 | 0.00124 |
1016 | 382 371 277 178 | 0.02129 |
1017 | 386 373 289 178 | 0.00239 |
1018 | 375 373 287 186 | 0.00985 |
1019 | 380 373 287 185 | 0.00293 |
1020 | 388 369 289 184 | 0.00284 |
1021 | 380 373 289 186 | 0.00177 |
1022 | 380 375 281 181 | 0.00009 |
1023 | 380 379 281 181 | 0.00009 |
1024 | 387 373 281 182 | 0.00009 |
1025 | 380 365 281 186 | 0.00018 |
1026 | 390 369 289 186 | 0.00328 |
1027 | 391 371 277 181 | 0.00044 |
1028 | 376 369 291 186 | 0.00106 |
1029 | 380 365 281 182 | 0.00160 |
1030 | 380 373 293 178 | 0.00213 |
1031 | 382 371 277 186 | 0.00124 |
1032 | 382 377 277 178 | 0.00009 |
1033 | 382 379 277 181 | 0.00337 |
1034 | 382 379 277 182 | 0.00053 |
1035 | 386 373 277 184 | 0.00009 |
1036 | 389 365 289 180 | 0.00160 |
1040 | 380 371 277 186 | 0.00053 |
1043 | 393 381 277 183 | 0.00142 |
1045 | 376 371 277 186 | 0.00062 |
1046 | 376 379 291 180 | 0.00035 |
1052 | 380 372 289 184 | 0.00035 |
1053 | 382 377 277 186 | 0.00018 |
1054 | 382 379 277 184 | 0.00018 |
1065 | 380 371 277 181 | 0.00018 |
1069 | 380 365 281 184 | 0.00009 |
1084 | 376 373 277 184 | 0.00027 |
1092 | 376 379 277 181 | 0.00018 |
1093 | 386 379 277 180 | 0.00044 |
1102 | 389 375 293 180 | 0.00009 |
1103 | 389 375 293 181 | 0.00018 |
1105 | 382 379 277 178 | 0.00373 |
1106 | 395 379 277 178 | 0.00009 |
1107 | 376 375 293 183 | 0.00018 |
1109 | 381 379 291 186 | 0.00151 |
1111 | 387 378 287 182 | 0.00009 |
1130 | 380 373 287 178 | 0.00009 |
1134 | 384 365 291 178 | 0.00018 |
1141 | 380 365 281 180 | 0.00018 |
1168 | 382 379 289 186 | 0.00018 |
1169 | 380 365 277 180 | 0.00098 |
1225 | 387 374 287 186 | 0.00009 |
1234 | 380 371 281 181 | 0.00018 |
1265 | 387 375 277 184 | 0.00009 |
1270 | 376 365 281 181 | 0.00009 |
1271 | 387 375 277 181 | 0.00018 |
1279 | 393 379 277 186 | 0.00009 |
null | 0.00009 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Poodle (n=5637) |
---|---|---|
2001 | 343 324 284 | 0.60050 |
2002 | 343 327 280 | 0.08497 |
2003 | 343 324 282 | 0.10600 |
2004 | 351 327 268 | 0.03069 |
2005 | 339 322 280 | 0.01499 |
2006 | 339 325 280 | 0.03335 |
2007 | 351 327 280 | 0.01712 |
2008 | 339 327 276 | 0.01499 |
2009 | 351 324 280 | 0.00701 |
2010 | 345 329 280 | 0.01126 |
2011 | 345 322 284 | 0.01943 |
2012 | 345 322 280 | 0.00727 |
2013 | 345 327 284 | 0.01029 |
2014 | 339 322 284 | 0.01925 |
2015 | 339 327 280 | 0.00399 |
2016 | 339 323 284 | 0.00310 |
2017 | 343 322 280 | 0.00213 |
2019 | 345 324 284 | 0.00009 |
2020 | 349 324 284 | 0.00018 |
2021 | 339 324 268 | 0.00381 |
2022 | 339 327 282 | 0.00044 |
2023 | 341 323 282 | 0.00213 |
2024 | 343 323 280 | 0.00062 |
2025 | 351 321 280 | 0.00160 |
2026 | 351 324 284 | 0.00098 |
2028 | 345 327 288 | 0.00053 |
2032 | 339 323 280 | 0.00044 |
2035 | 341 323 280 | 0.00009 |
2037 | 341 327 280 | 0.00044 |
2039 | 345 327 276 | 0.00053 |
2040 | 345 327 280 | 0.00009 |
2048 | 339 331 282 | 0.00018 |
2050 | 341 327 284 | 0.00018 |
2053 | 343 324 280 | 0.00009 |
2064 | 351 327 284 | 0.00089 |
2066 | 339 324 280 | 0.00009 |
2101 | 341 324 280 | 0.00018 |
2115 | 343 327 284 | 0.00009 |
Allele Frequencies
# | Locus Name | Allele | Poodle (n=5638) |
---|---|---|---|
1 | AHT121 | 92 | 0.01259 |
94 | 0.02244 | ||
96 | 0.01233 | ||
98 | 0.31651 | ||
100 | 0.08531 | ||
102 | 0.00639 | ||
104 | 0.19777 | ||
106 | 0.08327 | ||
108 | 0.17231 | ||
110 | 0.06696 | ||
112 | 0.02324 | ||
114 | 0.00080 | ||
116 | 0.00009 | ||
2 | AHT137 | 131 | 0.23239 |
133 | 0.01038 | ||
135 | 0.00044 | ||
137 | 0.17536 | ||
139 | 0.00044 | ||
141 | 0.36580 | ||
143 | 0.01322 | ||
145 | 0.04621 | ||
147 | 0.05836 | ||
149 | 0.00257 | ||
151 | 0.09455 | ||
153 | 0.00027 | ||
3 | AHTH130 | 111 | 0.01689 |
117 | 0.00234 | ||
119 | 0.37972 | ||
121 | 0.14148 | ||
123 | 0.07824 | ||
125 | 0.00117 | ||
127 | 0.13349 | ||
129 | 0.21667 | ||
131 | 0.01536 | ||
133 | 0.01258 | ||
135 | 0.00207 | ||
4 | AHTh171-A | 217 | 0.00603 |
219 | 0.37052 | ||
221 | 0.23076 | ||
223 | 0.00630 | ||
225 | 0.14154 | ||
227 | 0.00905 | ||
229 | 0.04931 | ||
231 | 0.02182 | ||
233 | 0.00151 | ||
235 | 0.14376 | ||
237 | 0.01942 | ||
5 | AHTh260 | 238 | 0.57346 |
240 | 0.03123 | ||
242 | 0.00027 | ||
244 | 0.05891 | ||
246 | 0.18728 | ||
248 | 0.06423 | ||
250 | 0.03380 | ||
252 | 0.03664 | ||
254 | 0.00630 | ||
256 | 0.00790 | ||
6 | AHTk211 | 87 | 0.18340 |
89 | 0.03929 | ||
91 | 0.67400 | ||
93 | 0.00408 | ||
95 | 0.09906 | ||
97 | 0.00018 | ||
7 | AHTk253 | 280 | 0.00887 |
284 | 0.12762 | ||
286 | 0.11360 | ||
288 | 0.40493 | ||
290 | 0.21453 | ||
292 | 0.12974 | ||
296 | 0.00071 | ||
8 | C22.279 | 116 | 0.08035 |
118 | 0.40076 | ||
120 | 0.00470 | ||
124 | 0.35589 | ||
126 | 0.06829 | ||
128 | 0.02155 | ||
130 | 0.06838 | ||
134 | 0.00009 | ||
9 | FH2001 | 124 | 0.01978 |
132 | 0.42858 | ||
136 | 0.07106 | ||
140 | 0.01810 | ||
144 | 0.23980 | ||
148 | 0.20901 | ||
152 | 0.01251 | ||
158 | 0.00115 | ||
10 | FH2054 | 148 | 0.01056 |
152 | 0.03158 | ||
156 | 0.55189 | ||
160 | 0.01756 | ||
164 | 0.00346 | ||
168 | 0.29599 | ||
172 | 0.07726 | ||
176 | 0.01073 | ||
180 | 0.00098 | ||
11 | FH2848 | 230 | 0.01526 |
232 | 0.01579 | ||
234 | 0.01260 | ||
236 | 0.05341 | ||
238 | 0.13698 | ||
240 | 0.68896 | ||
242 | 0.07647 | ||
244 | 0.00018 | ||
246 | 0.00035 | ||
12 | INRA21 | 91 | 0.35465 |
93 | 0.00009 | ||
95 | 0.40369 | ||
97 | 0.04762 | ||
99 | 0.05534 | ||
101 | 0.11431 | ||
103 | 0.00745 | ||
105 | 0.01392 | ||
109 | 0.00293 | ||
13 | INU005 | 110 | 0.01978 |
120 | 0.00009 | ||
122 | 0.00053 | ||
124 | 0.51419 | ||
126 | 0.44839 | ||
128 | 0.00186 | ||
130 | 0.01171 | ||
132 | 0.00115 | ||
138 | 0.00231 | ||
14 | INU030 | 144 | 0.32334 |
146 | 0.14926 | ||
148 | 0.06509 | ||
150 | 0.08691 | ||
152 | 0.37425 | ||
154 | 0.00080 | ||
156 | 0.00027 | ||
158 | 0.00009 | ||
15 | INU055 | 208 | 0.00160 |
210 | 0.21896 | ||
212 | 0.05924 | ||
214 | 0.29416 | ||
216 | 0.37008 | ||
218 | 0.03938 | ||
220 | 0.01534 | ||
222 | 0.00124 | ||
16 | LEI004 | 85 | 0.65389 |
95 | 0.10112 | ||
97 | 0.00488 | ||
105 | 0.00071 | ||
107 | 0.20685 | ||
109 | 0.03255 | ||
17 | REN105L03 | 227 | 0.01020 |
231 | 0.27940 | ||
233 | 0.19682 | ||
235 | 0.00745 | ||
237 | 0.01508 | ||
239 | 0.01171 | ||
241 | 0.47907 | ||
243 | 0.00027 | ||
18 | REN162C04 | 200 | 0.02049 |
202 | 0.17057 | ||
204 | 0.06848 | ||
206 | 0.54435 | ||
208 | 0.08932 | ||
210 | 0.06395 | ||
212 | 0.04275 | ||
214 | 0.00009 | ||
19 | REN169D01 | 202 | 0.00978 |
210 | 0.00133 | ||
212 | 0.07039 | ||
214 | 0.00089 | ||
216 | 0.41086 | ||
218 | 0.25773 | ||
220 | 0.00196 | ||
222 | 0.05066 | ||
224 | 0.17446 | ||
226 | 0.02195 | ||
20 | REN169O18 | 156 | 0.00124 |
160 | 0.03406 | ||
162 | 0.56573 | ||
164 | 0.31515 | ||
166 | 0.01747 | ||
168 | 0.02413 | ||
170 | 0.03291 | ||
172 | 0.00931 | ||
21 | REN247M23 | 266 | 0.03388 |
268 | 0.52803 | ||
270 | 0.23222 | ||
272 | 0.19869 | ||
274 | 0.00257 | ||
278 | 0.00461 | ||
22 | REN54P11 | 222 | 0.00319 |
226 | 0.26658 | ||
228 | 0.16673 | ||
230 | 0.00399 | ||
232 | 0.33478 | ||
234 | 0.20965 | ||
236 | 0.00417 | ||
238 | 0.01011 | ||
242 | 0.00080 | ||
23 | REN64E19 | 139 | 0.00239 |
143 | 0.00505 | ||
145 | 0.42719 | ||
147 | 0.24690 | ||
149 | 0.03521 | ||
153 | 0.25709 | ||
155 | 0.02616 | ||
24 | VGL0760 | 12 | 0.29732 |
13 | 0.00124 | ||
14 | 0.01384 | ||
15 | 0.00843 | ||
18 | 0.00151 | ||
19 | 0.08489 | ||
19.2 | 0.14050 | ||
20 | 0.03637 | ||
20.2 | 0.16108 | ||
21 | 0.00133 | ||
21.2 | 0.05366 | ||
22.2 | 0.01694 | ||
23.2 | 0.10866 | ||
24.2 | 0.05969 | ||
25.2 | 0.01410 | ||
26.2 | 0.00044 | ||
25 | VGL0910 | 12 | 0.00044 |
13 | 0.04869 | ||
14 | 0.01720 | ||
15 | 0.01889 | ||
15.1 | 0.01587 | ||
16 | 0.00027 | ||
16.1 | 0.00479 | ||
17.1 | 0.10748 | ||
18.1 | 0.27199 | ||
19 | 0.00009 | ||
19.1 | 0.13010 | ||
20.1 | 0.04221 | ||
21.1 | 0.27616 | ||
22 | 0.00727 | ||
22.1 | 0.02315 | ||
23 | 0.03042 | ||
23.1 | 0.00372 | ||
24 | 0.00124 | ||
26 | VGL1063 | 8 | 0.02811 |
9 | 0.00222 | ||
10 | 0.00009 | ||
11 | 0.00160 | ||
12 | 0.03441 | ||
13 | 0.16274 | ||
14 | 0.13861 | ||
15 | 0.08726 | ||
16 | 0.09800 | ||
17 | 0.03237 | ||
18 | 0.04381 | ||
19 | 0.29691 | ||
20 | 0.04079 | ||
21 | 0.02492 | ||
22 | 0.00656 | ||
23 | 0.00151 | ||
24 | 0.00009 | ||
27 | VGL1165 | 13 | 0.00009 |
14 | 0.00018 | ||
15 | 0.00647 | ||
16 | 0.04239 | ||
17 | 0.00399 | ||
18 | 0.01853 | ||
19 | 0.00913 | ||
20 | 0.00080 | ||
21 | 0.07884 | ||
22 | 0.00302 | ||
23 | 0.00284 | ||
24 | 0.01587 | ||
25 | 0.11360 | ||
25.3 | 0.00009 | ||
26 | 0.47712 | ||
27 | 0.10837 | ||
28 | 0.11059 | ||
29 | 0.00222 | ||
30 | 0.00452 | ||
31 | 0.00098 | ||
32 | 0.00027 | ||
34 | 0.00009 | ||
28 | VGL1828 | 14 | 0.03742 |
15 | 0.00053 | ||
16 | 0.04674 | ||
17 | 0.02288 | ||
18 | 0.08726 | ||
19 | 0.42586 | ||
20 | 0.33886 | ||
21 | 0.03335 | ||
22 | 0.00701 | ||
23 | 0.00009 | ||
29 | VGL2009 | 9 | 0.45326 |
10 | 0.00639 | ||
11 | 0.03459 | ||
12 | 0.04656 | ||
13 | 0.24424 | ||
14 | 0.18659 | ||
15 | 0.02820 | ||
16 | 0.00018 | ||
30 | VGL2409 | 13 | 0.03921 |
14 | 0.26384 | ||
15 | 0.18506 | ||
16 | 0.15401 | ||
17 | 0.19943 | ||
18 | 0.13432 | ||
19 | 0.02369 | ||
20 | 0.00044 | ||
31 | VGL2918 | 7 | 0.00009 |
12 | 0.00505 | ||
13 | 0.11414 | ||
14 | 0.20601 | ||
15 | 0.15724 | ||
16 | 0.04292 | ||
16.3 | 0.00142 | ||
17 | 0.00222 | ||
17.3 | 0.03193 | ||
18.3 | 0.02190 | ||
19.3 | 0.11901 | ||
20.3 | 0.11742 | ||
21.3 | 0.14225 | ||
22.3 | 0.03503 | ||
23.3 | 0.00337 | ||
32 | VGL3008 | 12 | 0.00009 |
13 | 0.01162 | ||
14 | 0.03370 | ||
15 | 0.23484 | ||
16 | 0.03813 | ||
17 | 0.50133 | ||
18 | 0.02545 | ||
18.2 | 0.00018 | ||
19 | 0.12841 | ||
20 | 0.02386 | ||
21 | 0.00231 | ||
23 | 0.00009 | ||
33 | VGL3235 | 12 | 0.15458 |
13 | 0.04949 | ||
14 | 0.15910 | ||
15 | 0.04683 | ||
16 | 0.29940 | ||
17 | 0.22038 | ||
18 | 0.06917 | ||
19 | 0.00106 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5638 | 10.121 | 3.735 | 0.680 | 0.700 | 0.030 | |
SE | 0.641 | 0.230 | 0.017 | 0.017 | 0.003 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5638 | 8.714 | 2.990 | 0.583 | 0.604 | 0.034 | |
SE | 1.173 | 0.467 | 0.058 | 0.059 | 0.007 |
Standard genetic assessment for individual STR loci
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 5638 | 13 | 5.289 | 0.794 | 0.811 | 0.021 |
2 | AHT137 | 5638 | 12 | 4.286 | 0.755 | 0.767 | 0.015 |
3 | AHTH130 | 5638 | 11 | 4.241 | 0.737 | 0.764 | 0.036 |
4 | AHTh171-A | 5638 | 11 | 4.261 | 0.755 | 0.765 | 0.014 |
5 | AHTh260 | 5638 | 10 | 2.666 | 0.606 | 0.625 | 0.030 |
6 | AHTk211 | 5638 | 6 | 2.003 | 0.473 | 0.501 | 0.056 |
7 | AHTk253 | 5638 | 7 | 3.905 | 0.737 | 0.744 | 0.009 |
8 | C22.279 | 5638 | 8 | 3.294 | 0.704 | 0.696 | -0.011 |
9 | FH2001 | 5638 | 8 | 3.439 | 0.689 | 0.709 | 0.028 |
10 | FH2054 | 5638 | 9 | 2.502 | 0.600 | 0.600 | 0.001 |
11 | FH2848 | 5638 | 9 | 1.989 | 0.472 | 0.497 | 0.050 |
12 | INRA21 | 5638 | 9 | 3.253 | 0.667 | 0.693 | 0.038 |
13 | INU005 | 5638 | 9 | 2.146 | 0.511 | 0.534 | 0.043 |
14 | INU030 | 5638 | 8 | 3.588 | 0.690 | 0.721 | 0.044 |
15 | INU055 | 5638 | 8 | 3.614 | 0.711 | 0.723 | 0.017 |
16 | LEI004 | 5638 | 6 | 2.076 | 0.514 | 0.518 | 0.008 |
17 | REN105L03 | 5638 | 8 | 2.883 | 0.621 | 0.653 | 0.049 |
18 | REN162C04 | 5638 | 8 | 2.903 | 0.621 | 0.656 | 0.053 |
19 | REN169D01 | 5638 | 10 | 3.653 | 0.685 | 0.726 | 0.057 |
20 | REN169O18 | 5638 | 8 | 2.366 | 0.553 | 0.577 | 0.042 |
21 | REN247M23 | 5638 | 6 | 2.678 | 0.597 | 0.627 | 0.047 |
22 | REN54P11 | 5638 | 9 | 3.921 | 0.700 | 0.745 | 0.060 |
23 | REN64E19 | 5638 | 7 | 3.210 | 0.669 | 0.688 | 0.029 |
24 | VGL0760 | 5638 | 16 | 6.187 | 0.827 | 0.838 | 0.014 |
25 | VGL0910 | 5638 | 18 | 5.396 | 0.808 | 0.815 | 0.008 |
26 | VGL1063 | 5638 | 17 | 6.315 | 0.820 | 0.842 | 0.026 |
27 | VGL1165 | 5638 | 22 | 3.659 | 0.690 | 0.727 | 0.050 |
28 | VGL1828 | 5638 | 10 | 3.236 | 0.668 | 0.691 | 0.033 |
29 | VGL2009 | 5638 | 8 | 3.288 | 0.660 | 0.696 | 0.052 |
30 | VGL2409 | 5638 | 8 | 5.334 | 0.805 | 0.813 | 0.010 |
31 | VGL2918 | 5638 | 15 | 7.519 | 0.859 | 0.867 | 0.010 |
32 | VGL3008 | 5638 | 12 | 3.059 | 0.662 | 0.673 | 0.017 |
33 | VGL3235 | 5638 | 8 | 5.080 | 0.775 | 0.803 | 0.035 |
Standard genetic assessment for 7 STRs in the DLA region
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 5638 | 15 | 3.449 | 0.687 | 0.710 | 0.033 |
2 | DLA I-4ACA | 5638 | 11 | 4.806 | 0.775 | 0.792 | 0.021 |
3 | DLA I-4BCT | 5638 | 6 | 2.566 | 0.588 | 0.610 | 0.036 |
4 | DLA1131 | 5638 | 9 | 4.645 | 0.760 | 0.785 | 0.031 |
5 | 5ACA | 5638 | 6 | 1.548 | 0.349 | 0.354 | 0.014 |
6 | 5ACT | 5638 | 8 | 1.820 | 0.439 | 0.451 | 0.026 |
7 | 5BCA | 5638 | 6 | 2.098 | 0.485 | 0.523 | 0.074 |