Updated Feb 25, 2025
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Poodle (n=5665) |
---|---|---|
1001 | 380 373 281 182 | 0.26646 |
1002 | 380 365 281 181 | 0.16055 |
1003 | 387 375 277 186 | 0.17449 |
1004 | 393 379 277 183 | 0.08350 |
1005 | 389 371 277 181 | 0.06955 |
1006 | 387 375 293 180 | 0.04934 |
1007 | 380 372 281 182 | 0.03336 |
1008 | 386 373 289 182 | 0.01227 |
1009 | 382 377 277 184 | 0.01483 |
1010 | 384 371 277 186 | 0.01121 |
1011 | 376 365 281 180 | 0.01924 |
1012 | 388 369 289 188 | 0.01465 |
1013 | 392 373 289 186 | 0.00847 |
1014 | 375 373 287 178 | 0.01077 |
1015 | 380 373 291 186 | 0.00124 |
1016 | 382 371 277 178 | 0.02127 |
1017 | 386 373 289 178 | 0.00238 |
1018 | 375 373 287 186 | 0.00997 |
1019 | 380 373 287 185 | 0.00291 |
1020 | 388 369 289 184 | 0.00282 |
1021 | 380 373 289 186 | 0.00177 |
1022 | 380 375 281 181 | 0.00009 |
1023 | 380 379 281 181 | 0.00009 |
1024 | 387 373 281 182 | 0.00009 |
1025 | 380 365 281 186 | 0.00018 |
1026 | 390 369 289 186 | 0.00327 |
1027 | 391 371 277 181 | 0.00044 |
1028 | 376 369 291 186 | 0.00106 |
1029 | 380 365 281 182 | 0.00159 |
1030 | 380 373 293 178 | 0.00212 |
1031 | 382 371 277 186 | 0.00124 |
1032 | 382 377 277 178 | 0.00009 |
1033 | 382 379 277 181 | 0.00335 |
1034 | 382 379 277 182 | 0.00053 |
1035 | 386 373 277 184 | 0.00009 |
1036 | 389 365 289 180 | 0.00159 |
1040 | 380 371 277 186 | 0.00062 |
1043 | 393 381 277 183 | 0.00141 |
1045 | 376 371 277 186 | 0.00062 |
1046 | 376 379 291 180 | 0.00035 |
1052 | 380 372 289 184 | 0.00035 |
1053 | 382 377 277 186 | 0.00018 |
1054 | 382 379 277 184 | 0.00018 |
1065 | 380 371 277 181 | 0.00018 |
1069 | 380 365 281 184 | 0.00009 |
1084 | 376 373 277 184 | 0.00026 |
1092 | 376 379 277 181 | 0.00018 |
1093 | 386 379 277 180 | 0.00044 |
1102 | 389 375 293 180 | 0.00009 |
1103 | 389 375 293 181 | 0.00018 |
1105 | 382 379 277 178 | 0.00371 |
1106 | 395 379 277 178 | 0.00009 |
1107 | 376 375 293 183 | 0.00018 |
1109 | 381 379 291 186 | 0.00150 |
1111 | 387 378 287 182 | 0.00018 |
1130 | 380 373 287 178 | 0.00009 |
1134 | 384 365 291 178 | 0.00018 |
1141 | 380 365 281 180 | 0.00018 |
1168 | 382 379 289 186 | 0.00018 |
1169 | 380 365 277 180 | 0.00097 |
1225 | 387 374 287 186 | 0.00009 |
1234 | 380 371 281 181 | 0.00018 |
1265 | 387 375 277 184 | 0.00009 |
1270 | 376 365 281 181 | 0.00009 |
1271 | 387 375 277 181 | 0.00018 |
1279 | 393 379 277 186 | 0.00009 |
null | 0.00009 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Poodle (n=5665) |
---|---|---|
2001 | 343 324 284 | 0.60079 |
2002 | 343 327 280 | 0.08482 |
2003 | 343 324 282 | 0.10635 |
2004 | 351 327 268 | 0.03063 |
2005 | 339 322 280 | 0.01492 |
2006 | 339 325 280 | 0.03336 |
2007 | 351 327 280 | 0.01703 |
2008 | 339 327 276 | 0.01492 |
2009 | 351 324 280 | 0.00697 |
2010 | 345 329 280 | 0.01121 |
2011 | 345 322 284 | 0.01933 |
2012 | 345 322 280 | 0.00724 |
2013 | 345 327 284 | 0.01024 |
2014 | 339 322 284 | 0.01924 |
2015 | 339 327 280 | 0.00397 |
2016 | 339 323 284 | 0.00309 |
2017 | 343 322 280 | 0.00212 |
2019 | 345 324 284 | 0.00009 |
2020 | 349 324 284 | 0.00018 |
2021 | 339 324 268 | 0.00380 |
2022 | 339 327 282 | 0.00044 |
2023 | 341 323 282 | 0.00212 |
2024 | 343 323 280 | 0.00071 |
2025 | 351 321 280 | 0.00159 |
2026 | 351 324 284 | 0.00097 |
2028 | 345 327 288 | 0.00062 |
2032 | 339 323 280 | 0.00044 |
2035 | 341 323 280 | 0.00009 |
2037 | 341 327 280 | 0.00044 |
2039 | 345 327 276 | 0.00053 |
2040 | 345 327 280 | 0.00009 |
2048 | 339 331 282 | 0.00018 |
2050 | 341 327 284 | 0.00018 |
2053 | 343 324 280 | 0.00009 |
2064 | 351 327 284 | 0.00088 |
2066 | 339 324 280 | 0.00009 |
2101 | 341 324 280 | 0.00018 |
2115 | 343 327 284 | 0.00009 |
Allele Frequencies
# | Locus Name | Allele | Poodle (n=5666) |
---|---|---|---|
1 | AHT121 | 92 | 0.01280 |
94 | 0.02233 | ||
96 | 0.01235 | ||
98 | 0.31663 | ||
100 | 0.08525 | ||
102 | 0.00644 | ||
104 | 0.19794 | ||
106 | 0.08339 | ||
108 | 0.17181 | ||
110 | 0.06698 | ||
112 | 0.02321 | ||
114 | 0.00079 | ||
116 | 0.00009 | ||
2 | AHT137 | 131 | 0.23222 |
133 | 0.01033 | ||
135 | 0.00088 | ||
137 | 0.17529 | ||
139 | 0.00044 | ||
141 | 0.36523 | ||
143 | 0.01315 | ||
145 | 0.04607 | ||
147 | 0.05878 | ||
149 | 0.00256 | ||
151 | 0.09479 | ||
153 | 0.00026 | ||
3 | AHTH130 | 111 | 0.01716 |
117 | 0.00241 | ||
119 | 0.37942 | ||
121 | 0.14149 | ||
123 | 0.07848 | ||
125 | 0.00125 | ||
127 | 0.13309 | ||
129 | 0.21684 | ||
131 | 0.01528 | ||
133 | 0.01251 | ||
135 | 0.00206 | ||
4 | AHTh171-A | 217 | 0.00600 |
219 | 0.37072 | ||
221 | 0.23067 | ||
223 | 0.00627 | ||
225 | 0.14137 | ||
227 | 0.00900 | ||
229 | 0.04906 | ||
231 | 0.02197 | ||
233 | 0.00150 | ||
235 | 0.14402 | ||
237 | 0.01941 | ||
5 | AHTh260 | 238 | 0.57292 |
240 | 0.03116 | ||
242 | 0.00026 | ||
244 | 0.05888 | ||
246 | 0.18803 | ||
248 | 0.06418 | ||
250 | 0.03372 | ||
252 | 0.03672 | ||
254 | 0.00627 | ||
256 | 0.00786 | ||
6 | AHTk211 | 87 | 0.18355 |
89 | 0.03927 | ||
91 | 0.67420 | ||
93 | 0.00406 | ||
95 | 0.09875 | ||
97 | 0.00018 | ||
7 | AHTk253 | 280 | 0.00882 |
284 | 0.12760 | ||
286 | 0.11366 | ||
288 | 0.40558 | ||
290 | 0.21408 | ||
292 | 0.12954 | ||
296 | 0.00071 | ||
8 | C22.279 | 116 | 0.08022 |
118 | 0.40116 | ||
120 | 0.00468 | ||
124 | 0.35572 | ||
126 | 0.06830 | ||
128 | 0.02144 | ||
130 | 0.06839 | ||
134 | 0.00009 | ||
9 | FH2001 | 124 | 0.01969 |
132 | 0.42779 | ||
136 | 0.07159 | ||
140 | 0.01810 | ||
144 | 0.24011 | ||
148 | 0.20895 | ||
152 | 0.01262 | ||
158 | 0.00115 | ||
10 | FH2054 | 148 | 0.01050 |
152 | 0.03160 | ||
156 | 0.55199 | ||
160 | 0.01748 | ||
164 | 0.00353 | ||
168 | 0.29594 | ||
172 | 0.07732 | ||
176 | 0.01068 | ||
180 | 0.00097 | ||
11 | FH2848 | 230 | 0.01527 |
232 | 0.01571 | ||
234 | 0.01262 | ||
236 | 0.05350 | ||
238 | 0.13683 | ||
240 | 0.68918 | ||
242 | 0.07636 | ||
244 | 0.00018 | ||
246 | 0.00035 | ||
12 | INRA21 | 91 | 0.35395 |
93 | 0.00009 | ||
95 | 0.40443 | ||
97 | 0.04739 | ||
99 | 0.05524 | ||
101 | 0.11472 | ||
103 | 0.00741 | ||
105 | 0.01385 | ||
109 | 0.00291 | ||
13 | INU005 | 110 | 0.01968 |
120 | 0.00009 | ||
122 | 0.00053 | ||
124 | 0.51377 | ||
126 | 0.44899 | ||
128 | 0.00185 | ||
130 | 0.01165 | ||
132 | 0.00115 | ||
138 | 0.00229 | ||
14 | INU030 | 144 | 0.32333 |
146 | 0.14896 | ||
148 | 0.06513 | ||
150 | 0.08727 | ||
152 | 0.37416 | ||
154 | 0.00079 | ||
156 | 0.00026 | ||
158 | 0.00009 | ||
15 | INU055 | 208 | 0.00159 |
210 | 0.21876 | ||
212 | 0.05921 | ||
214 | 0.29465 | ||
216 | 0.36975 | ||
218 | 0.03936 | ||
220 | 0.01544 | ||
222 | 0.00124 | ||
16 | LEI004 | 85 | 0.65425 |
95 | 0.10113 | ||
97 | 0.00485 | ||
105 | 0.00071 | ||
107 | 0.20667 | ||
109 | 0.03239 | ||
17 | REN105L03 | 227 | 0.01015 |
231 | 0.27899 | ||
233 | 0.19718 | ||
235 | 0.00741 | ||
237 | 0.01500 | ||
239 | 0.01174 | ||
241 | 0.47926 | ||
243 | 0.00026 | ||
18 | REN162C04 | 200 | 0.02048 |
202 | 0.17079 | ||
204 | 0.06867 | ||
206 | 0.54440 | ||
208 | 0.08923 | ||
210 | 0.06372 | ||
212 | 0.04263 | ||
214 | 0.00009 | ||
19 | REN169D01 | 202 | 0.00973 |
210 | 0.00133 | ||
212 | 0.07022 | ||
214 | 0.00088 | ||
216 | 0.41095 | ||
218 | 0.25778 | ||
220 | 0.00195 | ||
222 | 0.05058 | ||
224 | 0.17448 | ||
226 | 0.02211 | ||
20 | REN169O18 | 156 | 0.00124 |
160 | 0.03389 | ||
162 | 0.56575 | ||
164 | 0.31527 | ||
166 | 0.01756 | ||
168 | 0.02418 | ||
170 | 0.03283 | ||
172 | 0.00927 | ||
21 | REN247M23 | 266 | 0.03372 |
268 | 0.52816 | ||
270 | 0.23195 | ||
272 | 0.19868 | ||
274 | 0.00256 | ||
278 | 0.00494 | ||
22 | REN54P11 | 222 | 0.00318 |
226 | 0.26650 | ||
228 | 0.16617 | ||
230 | 0.00441 | ||
232 | 0.33472 | ||
234 | 0.21002 | ||
236 | 0.00415 | ||
238 | 0.01006 | ||
242 | 0.00079 | ||
23 | REN64E19 | 139 | 0.00238 |
143 | 0.00503 | ||
145 | 0.42782 | ||
147 | 0.24665 | ||
149 | 0.03512 | ||
153 | 0.25688 | ||
155 | 0.02612 | ||
24 | VGL0760 | 12 | 0.29726 |
13 | 0.00141 | ||
14 | 0.01395 | ||
15 | 0.00838 | ||
18 | 0.00150 | ||
19 | 0.08473 | ||
19.2 | 0.14051 | ||
20 | 0.03645 | ||
20.2 | 0.16099 | ||
21 | 0.00132 | ||
21.2 | 0.05357 | ||
22.2 | 0.01695 | ||
23.2 | 0.10883 | ||
24.2 | 0.05958 | ||
25.2 | 0.01412 | ||
26.2 | 0.00044 | ||
25 | VGL0910 | 12 | 0.00044 |
13 | 0.04871 | ||
14 | 0.01712 | ||
15 | 0.01897 | ||
15.1 | 0.01580 | ||
16 | 0.00026 | ||
16.1 | 0.00477 | ||
17.1 | 0.10748 | ||
18.1 | 0.27144 | ||
19 | 0.00009 | ||
19.1 | 0.13025 | ||
20.1 | 0.04236 | ||
21.1 | 0.27647 | ||
22 | 0.00732 | ||
22.1 | 0.02321 | ||
23 | 0.03036 | ||
23.1 | 0.00371 | ||
24 | 0.00124 | ||
26 | VGL1063 | 8 | 0.02815 |
9 | 0.00221 | ||
10 | 0.00009 | ||
11 | 0.00159 | ||
12 | 0.03450 | ||
13 | 0.16308 | ||
14 | 0.13837 | ||
15 | 0.08754 | ||
16 | 0.09786 | ||
17 | 0.03221 | ||
18 | 0.04377 | ||
19 | 0.29695 | ||
20 | 0.04077 | ||
21 | 0.02480 | ||
22 | 0.00653 | ||
23 | 0.00150 | ||
24 | 0.00009 | ||
27 | VGL1165 | 13 | 0.00009 |
14 | 0.00018 | ||
15 | 0.00653 | ||
16 | 0.04262 | ||
17 | 0.00397 | ||
18 | 0.01853 | ||
19 | 0.00909 | ||
20 | 0.00079 | ||
21 | 0.07845 | ||
22 | 0.00300 | ||
23 | 0.00282 | ||
24 | 0.01588 | ||
25 | 0.11348 | ||
25.3 | 0.00009 | ||
26 | 0.47697 | ||
27 | 0.10837 | ||
28 | 0.11092 | ||
29 | 0.00229 | ||
30 | 0.00459 | ||
31 | 0.00097 | ||
32 | 0.00026 | ||
34 | 0.00009 | ||
28 | VGL1828 | 14 | 0.03742 |
15 | 0.00053 | ||
16 | 0.04668 | ||
17 | 0.02286 | ||
18 | 0.08710 | ||
19 | 0.42570 | ||
20 | 0.33904 | ||
21 | 0.03362 | ||
22 | 0.00697 | ||
23 | 0.00009 | ||
29 | VGL2009 | 9 | 0.45455 |
10 | 0.00635 | ||
11 | 0.03442 | ||
12 | 0.04642 | ||
13 | 0.24356 | ||
14 | 0.18637 | ||
15 | 0.02815 | ||
16 | 0.00018 | ||
30 | VGL2409 | 13 | 0.03928 |
14 | 0.26439 | ||
15 | 0.18476 | ||
16 | 0.15413 | ||
17 | 0.19889 | ||
18 | 0.13453 | ||
19 | 0.02357 | ||
20 | 0.00044 | ||
31 | VGL2918 | 7 | 0.00009 |
12 | 0.00512 | ||
13 | 0.11419 | ||
14 | 0.20597 | ||
15 | 0.15699 | ||
16 | 0.04306 | ||
16.3 | 0.00141 | ||
17 | 0.00221 | ||
17.3 | 0.03221 | ||
18.3 | 0.02180 | ||
19.3 | 0.11948 | ||
20.3 | 0.11701 | ||
21.3 | 0.14216 | ||
22.3 | 0.03495 | ||
23.3 | 0.00335 | ||
32 | VGL3008 | 12 | 0.00009 |
13 | 0.01174 | ||
14 | 0.03353 | ||
15 | 0.23482 | ||
16 | 0.03795 | ||
17 | 0.50159 | ||
18 | 0.02550 | ||
18.2 | 0.00018 | ||
19 | 0.12849 | ||
20 | 0.02374 | ||
21 | 0.00229 | ||
23 | 0.00009 | ||
33 | VGL3235 | 12 | 0.15434 |
13 | 0.04942 | ||
14 | 0.15946 | ||
15 | 0.04695 | ||
16 | 0.29977 | ||
17 | 0.21982 | ||
18 | 0.06918 | ||
19 | 0.00106 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5666 | 10.121 | 3.734 | 0.680 | 0.700 | 0.030 | |
SE | 0.641 | 0.230 | 0.017 | 0.017 | 0.003 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5666 | 8.714 | 2.988 | 0.583 | 0.603 | 0.034 | |
SE | 1.173 | 0.466 | 0.058 | 0.059 | 0.007 |
Standard genetic assessment for individual STR loci
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 5666 | 13 | 5.290 | 0.794 | 0.811 | 0.021 |
2 | AHT137 | 5666 | 12 | 4.294 | 0.756 | 0.767 | 0.015 |
3 | AHTH130 | 5666 | 11 | 4.245 | 0.737 | 0.764 | 0.035 |
4 | AHTh171-A | 5666 | 11 | 4.259 | 0.754 | 0.765 | 0.014 |
5 | AHTh260 | 5666 | 10 | 2.669 | 0.606 | 0.625 | 0.031 |
6 | AHTk211 | 5666 | 6 | 2.002 | 0.472 | 0.500 | 0.057 |
7 | AHTk253 | 5666 | 7 | 3.900 | 0.738 | 0.744 | 0.008 |
8 | C22.279 | 5666 | 8 | 3.292 | 0.704 | 0.696 | -0.011 |
9 | FH2001 | 5666 | 8 | 3.444 | 0.690 | 0.710 | 0.027 |
10 | FH2054 | 5666 | 9 | 2.501 | 0.600 | 0.600 | 0.000 |
11 | FH2848 | 5666 | 9 | 1.988 | 0.472 | 0.497 | 0.050 |
12 | INRA21 | 5666 | 9 | 3.251 | 0.666 | 0.692 | 0.039 |
13 | INU005 | 5666 | 9 | 2.146 | 0.511 | 0.534 | 0.043 |
14 | INU030 | 5666 | 8 | 3.590 | 0.690 | 0.721 | 0.043 |
15 | INU055 | 5666 | 8 | 3.614 | 0.711 | 0.723 | 0.017 |
16 | LEI004 | 5666 | 6 | 2.074 | 0.513 | 0.518 | 0.009 |
17 | REN105L03 | 5666 | 8 | 2.882 | 0.621 | 0.653 | 0.049 |
18 | REN162C04 | 5666 | 8 | 2.903 | 0.621 | 0.655 | 0.052 |
19 | REN169D01 | 5666 | 10 | 3.652 | 0.685 | 0.726 | 0.057 |
20 | REN169O18 | 5666 | 8 | 2.366 | 0.553 | 0.577 | 0.041 |
21 | REN247M23 | 5666 | 6 | 2.678 | 0.598 | 0.627 | 0.046 |
22 | REN54P11 | 5666 | 9 | 3.923 | 0.700 | 0.745 | 0.061 |
23 | REN64E19 | 5666 | 7 | 3.207 | 0.669 | 0.688 | 0.028 |
24 | VGL0760 | 5666 | 16 | 6.190 | 0.827 | 0.838 | 0.014 |
25 | VGL0910 | 5666 | 18 | 5.398 | 0.808 | 0.815 | 0.008 |
26 | VGL1063 | 5666 | 17 | 6.312 | 0.820 | 0.842 | 0.025 |
27 | VGL1165 | 5666 | 22 | 3.661 | 0.690 | 0.727 | 0.051 |
28 | VGL1828 | 5666 | 10 | 3.236 | 0.668 | 0.691 | 0.033 |
29 | VGL2009 | 5666 | 8 | 3.280 | 0.658 | 0.695 | 0.053 |
30 | VGL2409 | 5666 | 8 | 5.332 | 0.804 | 0.812 | 0.010 |
31 | VGL2918 | 5666 | 15 | 7.523 | 0.859 | 0.867 | 0.010 |
32 | VGL3008 | 5666 | 12 | 3.057 | 0.661 | 0.673 | 0.017 |
33 | VGL3235 | 5666 | 8 | 5.080 | 0.774 | 0.803 | 0.036 |
Standard genetic assessment for 7 STRs in the DLA region
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 5666 | 15 | 3.446 | 0.687 | 0.710 | 0.033 |
2 | DLA I-4ACA | 5666 | 11 | 4.805 | 0.775 | 0.792 | 0.021 |
3 | DLA I-4BCT | 5666 | 6 | 2.565 | 0.588 | 0.610 | 0.037 |
4 | DLA1131 | 5666 | 9 | 4.639 | 0.760 | 0.784 | 0.031 |
5 | 5ACA | 5666 | 6 | 1.546 | 0.348 | 0.353 | 0.015 |
6 | 5ACT | 5666 | 8 | 1.818 | 0.438 | 0.450 | 0.027 |
7 | 5BCA | 5666 | 6 | 2.097 | 0.485 | 0.523 | 0.073 |